Yeah, try as I might, I can't reproduce it.
Yeah, I was able to reproduce it at the end of level 13 like you suggested. That's some messed up shit indeed.
i found this problem in my map that i'm created that meant you could skip most of a puzzle. I solved it by creating 3 separate brushs, rather than 1 long one. It appears this bug doesn't work over different brushes, but i haven't tested it fully.
You could do that, or move one of your walls by a fraction of a unit (by pressing alt) (or does it round to the nearest unit while rendering?)
Lets face it, portal is full of bugs. All we can really do is point them out so valve can try and fix them.
portals also can be placed on angled surfaces if the angle is not big.
I noticed this glitch one of the first times I played through Portal. In chamber 15, right before the area most people tunnel through, where you are supposed to fling through the second fizzler to redirect the energy ball, you can shoot a portal on one side of the glass wall, then shoot the other, bumping it to the other side of the wall and bypassing the fizzler completely.